Publications

In this section the scientific publications of the X-omics partners are displayed. The X-omics consortium is a very large consortium and therefor generates a lot of publications (on average 50 publications per month). To inform you about the most important publications with a high impact, we have added a selection of publications below (displayed individually and searchable per expertise).

Transcriptionally imprinted glycomic signatures of acute myeloid leukemia

Blöchl, C. et al. (2023). Cell Biosci.

PMID: 36788594

Epigenetic and integrative cross-omics analyses of cerebral white matter hyperintensities on MRI

Yang, Y. et al. (2023). Brain.

PMID: 35943854

Lipid-induced transcriptomic changes in blood link to lipid metabolism and allergic response

Dekkers, KF. et al. (2023). Nat Commun.

PMID: 36725846

Comprehensive SMN1 and SMN2 profiling for spinal muscular atrophy analysis using long-read PacBio HiFi sequencing)

Chen, X. et al. (2023). Am J Hum Genet.

PMID: 36669496

A Solve-RD ClinVar-based reanalysis of 1,522 index cases from ERN-ITHACA reveals common pitfalls and misinterpretations in exome sequencing

Denommé-Pichon, AS. et al. (2023). Genet Med.

PMID: 36681873

Towards FAIRification of sensitive and fragmented rare disease patient data: challenges and solutions in European reference network registries

Dos Santos Vieira, B. et al. (2022). Orphanet J Rare Dis.

PMID: 36517834

Tackling the translational challenges of multi-omics research in the realm of European personalised medicine: A workshop report

Oldoni, E. et al. (2022). Front Mol Biosci.

PMID: 36310597

A multi-layer functional genomics analysis to understand noncoding genetic variation in lipids

Ramdas, S. et al. (2022). Am J Hum Genet.

PMID: 35931049

Metabolomic predictors of phenotypic traits can replace and complement measured clinical variable in population-scale expression profiling studies

Niehues, A. et el. (2022). BMC Genomics.

PMID: 35907790

Comparative Assessment of Quantification Methods for Tumor Tissue Phosphoproteomics

Zhang, Y. et el. (2022). Anal Chem.

PMID: 35880733

The RD-Connect Genome-Phenome Analysis Platform: Accelerating diagnosis, research, and gene discovery for rare diseases

Laurie, S. et al. (2022). Hum Mutat.

PMID: 35178824

Road to FAIR genomes: a gap analysis of NGS data generation and sharing in the Netherlands

Belien, JAM. et al. (2022). BMJ Open Sci.

PMID: 35505836

FAIR Genomes metadata schema promoting Next Generation Sequencing data reuse in Dutch healthcare and research

Velde, van der, KJ. et al. (2022). Sci Data.

PMID: 35418585

Genome-wide study of DNA methylation shows alterations in metabolic, inflammatory, and cholesterol pathways in ALS.

Hop, PJ. et al. (2022). Sci Transl Med.

PMID: 35196023

Effect of host genetics on the gut microbiome in 7,738 participants of the Dutch Microbiome Project.

Lopera-Maya, EA. et al. (2022).

PMID: 35115690

The power of genetic diversity in genome-wide association studies of lipids

Graham, SE. et al. (2021). Nature.

PMID: 34887591

The Data Use Ontology to streamline responsible access to human biomedical datasets

Lawson, J. et al. (2021). Cell Genom.

PMID: 34820659

Validating biomarkers and models for epigenetic inference of alcohol consumption from blood

Maas, SCE. et al. (2021). Clin Epigenetics.

PMID: 34702360

Lessons learned from unsolicited findings in clinical exome sequencing of 16,482 individuals

Schoot, van der, V. et al (2021). Eur J Hum Genet.

PMID: 34697415

Genetics and Not Shared Environment Explains Familial Resemblance in Adult Metabolomics Data

Pool, R. et al. (2020). Twin Res Hum Genet.

PMID: 32635965

Metabolic Age Based on the BBMRI-NL 1 H-NMR Metabolomics Repository as Biomarker of Age-related Disease

Akker, van den, EB. (2020). Circ Genom Precis Med.

PMID: 33079603

DNA methylation signatures of aggression and closely related constructs: A meta-analysis of epigenome-wide studies across the lifespan

Dongen, van, J. (2021). Mol Psychiatry.

PMID: 33420481

Identification of 371 genetic variants for age at first sex and birth linked to externalising behavior

Mills, MC. (2021). Nat Hum Behav.

PMID: 34211149

Dynamic binning peak detection and assessment of various lipidomics liquid chromatography-mass spectrometry pre-processing platforms

Feng, X. (2021). Anal Chim Acta.

PMID: 34172146

MSIWarp: A General Approach to Mass Alignment in Mass Spectrometry Imaging

Eriksson, JO. (2020). Anal Chem.

PMID: 33317272

The 'un-shrunk' partial correlation in Gaussian graphical modelsThe 'un-shrunk' partial correlation in Gaussian graphical models

Bernal, V. (2021). BMC Bioinformatics.

PMID: 34493207

Fragment Mass Spectrum Prediction Facilitates Site Localization of Phosphorylation

Yang, Y. (2021). J Proteome Res.

PMID: 32985198

Solving the unsolved rare diseases in Europe

Graessner, H. et al. (2021). Eur J Hum Genet.

PMID: 34140650

Metabolomics-Based Screening of Inborn Errors of Metabolism: Enhancing Clinical Application with a Robust Computational Pipeline

Hoegen, B. et al. (2021). Metabolites.

PMID: 34564390

The de novo FAIRification process of a registry for vascular anomalies

Groenen, KHJ. et al. (2021). Orphanet J Rare Dis.

PMID: 34481493

Deciphering osteoarthritis genetics across 826,690 individuals from 9 populations

Boer, CG. et al. (2021). Cell.

PMID: 34450027

Long-term trajectories of decline in cognition and daily functioning before and after stroke

Heshmatollah, A. et al. (2021). J Neurol Neurosurg Psychiatry.

PMID: 34230107

Solve-RD: systematic pan-European data sharing and collaborative analysis to solve rare diseases.

Zurek, B. et al. (2021). Eur J Hum Genet.

PMID: 34075208

Learning mutational signatures and their multidimensional genomic properties with TensorSignatures

Vöhringer, H. et al. (2021). Nat Commun.

PMID: 34131135

Benchmarking deep learning splice prediction tools using functional splice assays

Riepe, TV. et al. (2021). Hum Mutat.

PMID: 33942434

Personalized Proteome: Comparing Proteogenomics and Open Variant Search Approaches for Single Amino Acid Variant Detection

Salz, R. et al. (2021). J Proteome Res.

PMID: 33998808

Feasibility of predicting allele specific expression from DNA sequencing using machine learning

Zhang, Z. et al. (2021). Sci Rep.

PMID: 34012022

Neuroproteomics of the synapse: subcellular quantification of protein networks and signaling dynamics

Gelder, van, CAGH. et al. (2021). Mol Cell Proteomics.

PMID: 33933679

Integrated proteogenomic approach identifying a protein signature of COPD and a new splice variant of SORBS1

Brandsma, CA. et al. (2020). Thorax.

PMID: 31937552

Lifelines COVID-19 cohort; investigating COVID-19 infection and its health and societal impacts in a Dutch population-based cohort

Mc Intyre,  K. et al. (2021). BMJ Open.

PMID: 33737436

Associations between the CADM2 gene, substance use, risky sexual behavior, and self-control: A phenome-wide association study

Arends RM, Pasman JA, Verweij KJH, Derks EM, Gordon SD, Hickie I, Thomas NS, Aliev F, Zietsch BP, van der Zee MD, Mitchell BL, Martin NG, Dick DM, Gillespie NA, de Geus EJC, Boomsma DI, Schellekens AFA, Vink JM.Addict Biol. 2021 Feb 18:e13015. doi: 10.1111/adb.13015. Online ahead of print.

PMID: 33604983

Special Issue on Software Tools and Resources: Acknowledging the Toolmakers of Science.

Weintraub, ST. et al. (2019). J Proteome Res. 18, 575.

PMID: 30704244

PaDuA: A Python Library for High-Throughput (Phospho)proteomics Data Analysis.

Ressa, A. et al. (2019). J Proteome Res. 18, 576-584.

PMID: 30525654

Cost-effective sequence analysis of 113 genes in 1,192 probands with retinitis pigmentosa and Leber congenital amaurosis

Panneman, DM. et al. (2023). Front Cell Dev Biol.

PMID:36819107

Comprehensive SMN1 and SMN2 profiling for spinal muscular atrophy analysis using long-read PacBio HiFi sequencing)

Chen, X. et al. (2023). Am J Hum Genet.

PMID: 36669496

A Solve-RD ClinVar-based reanalysis of 1,522 index cases from ERN-ITHACA reveals common pitfalls and misinterpretations in exome sequencing

Denommé-Pichon, AS. et al. (2023). Genet Med.

PMID: 36681873

Optical genome mapping and revisiting short-read genome sequencing data reveal previously overlooked structural variants disrupting retinal disease-associated genes

Bruijn, de, SE. et al. (2022). Genet Med.

PMID: 36524988

Altered and allele-specific open chromatin landscape reveals epigenetic and genetic regulators of innate immunity in COVID-19

Zhang, B. et al. (2022). Cell Genom.

PMID: 36474914

De novo mutation hotspots in homologous protein domains identify function-altering mutations in neurodevelopmental disorders

Wiel, L. et al. (2022). Am J Hum Genet.

PMID: 36563679

Diagnostic analysis of the highly complex OPN1LW/OPN1MW gene cluster using long-read sequencing and MLPA

Haer-Wigman, L. et al. (2022). NPJ Genom Med.

PMID: 36351915

A multi-layer functional genomics analysis to understand noncoding genetic variation in lipids

Ramdas, S. et al. (2022). Am J Hum Genet.

PMID: 35931049

The performance of genome sequencing as a first-tier test for neurodevelopmental disorders

Sander, van der, BPGH. et al. (2022). Eur J Hum Genet.

PMID: 36114283

Optical Genome Mapping: A Promising New Tool to Assess Genomic Complexity in Chronic Lymphocytic Leukemia (CLL)

Puiggros, A. et al. (2022). Cancers (Basel).

PMID: 35884436

The RD-Connect Genome-Phenome Analysis Platform: Accelerating diagnosis, research, and gene discovery for rare diseases

Laurie, S. et al. (2022). Hum Mutat.

PMID: 35178824

Reanalysis of exome negative patients with rare disease: a pragmatic workflow for diagnostic applications

Schobers, G. et al. (2022). Genome Med.

PMID: 35710456

How to proceed after “negative”exome: A review on genetic diagnostics, limitations, challenges, and emerging new multiomics techniques

Wortmann, SB. et al. (2022). J Inherit Metab Dis.

PMID: 35506430

Clinical exome sequencing – mistakes and caveats

Corominas, J. et al. (2022). Hum Mutat.

PMID: 35191116 

Effect of host genetics on the gut microbiome in 7,738 participants of the Dutch Microbiome Project.

Lopera-Maya, EA. et al. (2022).

PMID: 35115690

Optical genome mapping identifies rare structural variations as predisposition factors associated with severe COVID-19

Sahajpal, NS. et al. (2022). iScience.

PMID: 35036860

The power of genetic diversity in genome-wide association studies of lipids

Graham, SE. et al. (2021). Nature.

PMID: 34887591

Lessons learned from unsolicited findings in clinical exome sequencing of 16,482 individuals

Schoot, van der, V. et al (2021). Eur J Hum Genet.

PMID: 34697415

Multiple Myeloma Minimal Residual Disease Detection: Targeted Mass Spectrometry in Blood vs Next-Generation Sequencing in Bone Marrow

Langerhorst, P. et al. (2021). Clin Chem.

PMID: 34643690

DNA methylation signatures of aggression and closely related constructs: A meta-analysis of epigenome-wide studies across the lifespan

Dongen, van, J. (2021). Mol Psychiatry.

PMID: 33420481

Genomic and phenotypic insights from an atlas of genetic effects on DNA methylation

Min, JL. (2021). Nat Genet.

PMID: 34493871

Large-scale cis- and trans-eQTL analyses identify thousands of genetic loci and polygenic scores that regulate blood gene expression

Võsa, U. (2021). Nat Genet.

PMID: 34475573

Identification of 371 genetic variants for age at first sex and birth linked to externalising behavior

Mills, MC. (2021). Nat Hum Behav.

PMID: 34211149

Solving the unsolved rare diseases in Europe

Graessner, H. et al. (2021). Eur J Hum Genet.

PMID: 34140650

Identical twins carry a persistent epigenetic signature of early genome programming

Dongen, van, J. et al. (2021). Nat Commun.

PMID: 34584077

Metabolomic and lipidomic signatures associated with activation of human cDC1 (BDCA3+ /CD141+ ) dendritic cells

Basit, F. et al. (2021). Immunology.

PMID: 34431087

Genetic insights into biological mechanisms governing human ovarian ageing

Ruth, K.S. et al. (2021). Nature.

PMID: 34349265

Genetic predisposition (HLA-SE) is associated with ACPA-IgG variable domain glycosylation in the predisease phase of RA

Kissel, T. et al. (2021). Ann Rheum Dis.

PMID: 34385139

The genomic landscape of 85 advanced neuroendocrine neoplasms reveals subtype-heterogeneity and potential therapeutic targets

Riet, van, J. et al. (2021). Nat Commun.

PMID: 34326338

Reconstructing single-cell karyotype alterations in colorectal cancer identifies punctuated and gradual diversification patterns

Bollen, Y. et al. (2021).Nat Genet.

PMID: 34211178

Optical genome mapping identifies a germline retrotransposon insertion in SMARCB1 in two siblings with atypical teratoid rhabdoid tumors

Sabatella, M. et al. (2021). J Pathol.

PMID: 34231212

Next generation cytogenetics: comprehensive assessment of 52 hematological malignancy genomes by optical genome mapping

Neveling, K. et al. (2021). Am J Hum Genet.

PMID: 34237281

Optical genome mapping enables constitutional chromosomal aberration detection

Mantere, T. et al. (2021). Am J Hum Genet.

PMID: 34237280

A multi-ethnic epigenome-wide association study of leukocyte DNA methylation and blood lipids

Jhun, MA. et al. (2021). Nat Commun.

PMID: 34183656

Clinical Validation of Whole Genome Sequencing for Cancer Diagnostics

Roepman, P. et al. (2021). J Mol Diagn.

PMID: 33964451

Early technology assessment of using whole genome sequencing in personalised oncology

Simons, M. et al. (2021). Expert Rev Pharmacoecon Outcomes Res.

PMID: 33910430

Single-cell derived tumor organoids display diversity in HLA class I peptide presentation

Demmers, L.C. et al. (2020). Nat Commun.

PMID: 33087703

Integrated proteogenomic approach identifying a protein signature of COPD and a new splice variant of SORBS1

Brandsma, CA. et al. (2020). Thorax.

PMID: 31937552

Long-read trio sequencing of individuals with unsolved intellectual disability

Pauper, M. et al. (2021). Eur J Hum Genet. 637 – 648.

PMID: 33257779

Presence of Genetic Variants Among Young Men With COVID-19.

Van der Made, Cl. (2020). JAMA.

PMID: 32706371

Mutational signature in colorectal cancer caused by genotoxic pks + E. coli.

Pleguezuelos-Manzano, C. et al. (2020). Nature.

PMID: 32106218

SARS-CoV-2 productively infects human gut enterocytes.

Lamers, MM. et al. (2020). Science.

PMID: 32358202

Quantitative multiple fragment monitoring with enhanced in-source fragmentation/annotation mass spectrometry

Bernardo-Bermejo, S. et al. (2023). Nat Protoc.

PMID: 36755131

Omic-Scale High-Throughput Quantitative LC-MS/MS Approach for Circulatory Lipid Phenotyping in Clinical Research

Medina, J. et al. (2023). Anal Chem.

PMID: 36716250

Integrative Multi-omics Analysis of Childhood Aggressive Behavior

Hagenbeek, FA. et al. (2022). Behav Genet.

PMID: 36344863

Spatial dynamic metabolomics identifies metabolic cell fate trajectories in human kidney differentiation

Wang, G. et al. (2022). Cell Stem Cell.

PMID: 36332571

Novel CSF biomarkers of GLUT1 deficiency syndrome: implications beyond the brain's energy deficit

Peters, TMA. et al. (2022). J Inherit Metab Dis.

PMID: 36088537

Metabolomic predictors of phenotypic traits can replace and complement measured clinical variable in population-scale expression profiling studies

Niehues, A. et el. (2022). BMC Genomics.

PMID: 35907790

The Immunometabolic Atlas: A tool for design and interpretation of metabolomics studies in immunology

Maas, P. et al. (2022). PLoS One.

PMID: 3550647

Preparing ductal epithelial organoids for high-spatial-resolution molecular profiling using mass spectrometry imaging.

Bakker, B. et al. (2022). Nat Protoc.

PMID: 35181767

Metabolite Identification Using Infrared Ion Spectroscopy─Novel Biomarkers for Pyridoxine-Dependent Epilepsy

Outersterp, van, RE. et al. (2021). Anal Chem.

PMID: 34756024

Cross-Laboratory Standardization of Preclinical Lipidomics Using Differential Mobility Spectrometry and Multiple Reaction Monitoring

Ghorasaini, M. et al. (2021). Anal Chem.

PMID: 34859676

Genetics and Not Shared Environment Explains Familial Resemblance in Adult Metabolomics Data

Pool, R. et al. (2020). Twin Res Hum Genet.

PMID: 32635965

Metabolic Age Based on the BBMRI-NL 1 H-NMR Metabolomics Repository as Biomarker of Age-related Disease

Akker, van den, EB. (2020). Circ Genom Precis Med.

PMID: 33079603

Combined Metabolic and Chemical (CoMetChem) Labeling Using Stable Isotopes-a Strategy to Reveal Site-Specific Histone Acetylation and Deacetylation Rates by LC-MS

Pijkeren, van, A. (2021). Anal Chem.

PMID: 34519498

Metabolomic and lipidomic signatures associated with activation of human cDC1 (BDCA3+ /CD141+ ) dendritic cells

Basit, F. et al. (2021). Immunology.

PMID: 34431087

A multi-ethnic epigenome-wide association study of leukocyte DNA methylation and blood lipids

Jhun, MA. et al. (2021). Nat Commun.

PMID: 34183656

Untargeted metabolomics and infrared ion spectroscopy identify biomarkers for pyridoxine-dependent epilepsy

Engelke, UFG. et al. (2021). J Clin Invest.

PMID: 34138754

Results of an explorative clinical evaluation suggest immediate and persistent post-reperfusion metabolic paralysis drives kidney ischemia reperfusion injury

Lindeman J.H. et al. (2020). Kidney Int.

PMID: 32781105

Effect of metabolic genetic variants on long-term disease comorbidity in patients with type 2 diabetes

Abedian S et al. 2021. Sci Rep 11(1):2794.

PMID: 33531528

Reproducibility of Targeted Lipidome Analyses (Lipidyzer) in Plasma and Erythrocytes over a 6-Week Period

Loef, M. et al. (2020). Metabolites.

PMID: 33396510

Inhibition of ∆24-dehydrocholesterol reductase activates pro-resolving lipid mediator biosynthesis and inflammation resolution.

Körner, A. et al. (2019). Proc Natl Acad Sci U S A. 116, 20623 – 20634.

PMID: 31548397

Cholesterol Metabolism Is a Druggable Axis that Independently Regulates Tau and Amyloid-β in iPSC-Derived Alzheimer’s Disease Neurons.

van der Kant, R. et al. (2019). Cell Stem Cell. 24, 363-275.

PMID: 30686764

Fast LC-ESI-MS/MS analysis and influence of sampling conditions for gut metabolites in plasma and serum.

van der Laan, T. et al. (2019). Sci Rep. 9, 12370.

PMID: 31451722

Transcriptionally imprinted glycomic signatures of acute myeloid leukemia

Blöchl, C. et al. (2023). Cell Biosci.

PMID: 36788594

Dynamic monitoring of myeloma minimal residual disease with targeted mass spectrometry

Noori, S. et al. (2023). Blood Cancer J.

PMID: 36828828

De novo mutation hotspots in homologous protein domains identify function-altering mutations in neurodevelopmental disorders

Wiel, L. et al. (2022). Am J Hum Genet.

PMID: 36563679

Discriminating cross-reactivity in polyclonal IgG1 responses against SARS-CoV-2 variants of concern

Rijswijck, van, DMH. et al. (2022). Nat Commun.

PMID: 36243713

Charting the Proteoform Landscape of Serum Proteins in Individual Donors by High-Resolution Native Mass Spectrometry

Cramer, DAT. et al. (2022). Anal Chem.

PMID: 36074704

Comparative Assessment of Quantification Methods for Tumor Tissue Phosphoproteomics

Zhang, Y. et el. (2022). Anal Chem.

PMID: 35880733

Histidine phosphorylation in human cells; a needle or phantom in the haystack?

Leijten, NM. et al. (2022). Nat Methods.

PMID: 35726056

Label-free visual proteomics: Coupling MS- and EM-based approaches in structural biology

Klykov, O. et al. (2022). Mol Cell.

PMID: 35063097

Combined Quantitative (Phospho)proteomics and Mass Spectrometry Imaging Reveal Temporal and Spatial Protein Changes in Human Intestinal Ischemia-Reperfusion

Kip, AM. et al. (2021). J Proteome Res.

PMID: 34874173

Structural basis of soluble membrane attack complex packaging for clearance

Menny, A. et al. (2021). Nat Commun.

PMID: 34667172

Multiple Myeloma Minimal Residual Disease Detection: Targeted Mass Spectrometry in Blood vs Next-Generation Sequencing in Bone Marrow

Langerhorst, P. et al. (2021). Clin Chem.

PMID: 34643690

Active site variants in STT3A cause of dominant type I congenital disorder of glycosylation with neuromusculoskeletal findings

Wilson, MP. (2021). Am J Hum Genet.

PMID: 34653363

Large-scale cis- and trans-eQTL analyses identify thousands of genetic loci and polygenic scores that regulate blood gene expression

Võsa, U. (2021). Nat Genet.

PMID: 34475573

Oncogene-dependent sloppiness in mRNA translation

Champagne, J. (2021). Mol Cell.

PMID: 34562372

Human plasma IgG1 repertoires are simple, unique, and dynamic

Bondt, A. (2021). Cell Syst.

PMID: 34613904

High sensitivity glycomics in biomedicine

Lageveen-Kammeijer, GSM. et al. (2021). Mass Spectrom Rev.

PMID: 34494287

Genetic predisposition (HLA-SE) is associated with ACPA-IgG variable domain glycosylation in the predisease phase of RA

Kissel, T. et al. (2021). Ann Rheum Dis.

PMID: 34385139

Glucocorticoid receptor triggers a reversible drug-tolerant dormancy state with acquired therapeutic vulnerabilities in lung cancer

Prekovic, S. et al. (2021). Nat Commun.

PMID: 34272384

Neuroproteomics of the synapse: subcellular quantification of protein networks and signaling dynamics

Gelder, van, CAGH. et al. (2021). Mol Cell Proteomics.

PMID: 33933679

Single-cell derived tumor organoids display diversity in HLA class I peptide presentation

Demmers, L.C. et al. (2020). Nat Commun.

PMID: 33087703

Integrated proteogenomic approach identifying a protein signature of COPD and a new splice variant of SORBS1

Brandsma, CA. et al. (2020). Thorax.

PMID: 31937552

Adeno-associated virus capsid assembly is divergent and stochastic

Wörner, TP. et al. (2021). Nat Commun. 1642.

PMID: 33712599

Clonotypic Features of Rearranged Immunoglobulin Genes Yield Personalized Biomarkers for Minimal Residual Disease Monitoring in Multiple Myeloma

Langerhorst, P. et al. (2021). Clin Chem.

PMID: 33709101

Profiling the proteoforms of urinary prostate-specific antigen by capillary electrophoresis - mass spectrometry

Moran AB, Domínguez-Vega E, Nouta J, Pongracz T, de Reijke TM, Wuhrer M, Lageveen-Kammeijer GSM.J Proteomics. 2021 Feb 19;238:104148. doi: 10.1016/j.jprot.2021.104148. Online ahead of print.

PMID: 33618028

Combined kinesin-1 and kinesin-3 activity drives axonal trafficking of TrkB receptors in Rab6 carriers

Zahavi EE et al. (2021). Dev Cell. S1534-5807(21)00068-X. Online ahead of print.

PMID: 33571451

High-Resolution mRNA and Secretome Atlas of Human Enteroendocrine Cells.

Beumer, J. et al. (2020). Cell.

PMID: 32407674

Metabolic changes related to the IDH1 mutation in gliomas preserve TCA-cycle activity: An investigation at the protein level.

Dekker, LJM. et al. (2020). FASEB J. 34, 3646 – 3657.

PMID: 31960518

SARS-CoV-2 productively infects human gut enterocytes.

Lamers, MM. et al. (2020). Science.

PMID: 32358202

Integrating Serum Protein Electrophoresis with Mass Spectrometry, A New Workflow for M-Protein Detection and Quantification.

Zajec, M. et al. (2020). J Proteome Res.

PMID: 31895568

Highly sensitive CE-ESI-MS analysis of N-glycans from complex biological samples.

Lageveen-Kammeijer, GSM. et al. (2019). Nat Commun. 10, 2137.

PMID: 31086181

Automated workflow composition in mass spectrometry-based proteomics.

Palmblad, M. et al. (2019). Bioinformatics. 35, 656 – 664.

PMID: 30060113

Special Issue on Software Tools and Resources: Acknowledging the Toolmakers of Science.

Weintraub, ST. et al. (2019). J Proteome Res. 18, 575.

PMID: 30704244

First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study.

Lacobucci, C. et al. (2019). Anal Chem. 91, 6953-6961.

PMID: 31045356

Recommendations for performing, interpreting and reporting hydrogen deuterium exchange mass spectrometry (HDX-MS) experiments.

Masson, GR. et al. (2019). Nat Methods. 16, 595-602.

PMID: 31249422

PaDuA: A Python Library for High-Throughput (Phospho)proteomics Data Analysis.

Ressa, A. et al. (2019). J Proteome Res. 18, 576-584.

PMID: 30525654

Expanding the mass range for UVPD-based native top-down mass spectrometry.

Greisch, JF. et al. (2019). Chem Sci. 10, 7163-7171.

PMID: 31588283

Targeting proline in (phospho)proteomics.

van der Laarse, SAM. et al. (2019). FEBS J.

PMID: 31863553

NWO logoThis research was (partially) funded by NWO, project 184.034.019